BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028D02SP1|AL428888
(871 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1740 1659 0.0
>3x_Contig1740
Length = 21823
Score = 1659 bits (833), Expect = 0.0
Identities = 861/872 (98%), Gaps = 2/872 (0%)
Strand = Plus / Plus
Query: 1 ttgggacataatccgacaccactggatatttctcnacaaaatcttcaaggtactgtgaag 60
|||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 13477 ttgggacataatccatcaccactggatatttctctacaaaatcttcaaggtactgtgaag 13536
Query: 61 tgtttgaaagtgcggacatgtttgaagtattgctacaaagtatcaatgaaatgacaaaac 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 13537 tgtttgaaagtgcggacatgtt-gaagtattgctacaaagtatcaatgaaatgacaaaac 13595
Query: 121 agcagtatgtggaatttcttgtgagatcttcagattgttttcttacgttagttgcccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13596 agcagtatgtggaatttcttgtgagatcttcagattgttttcttacgttagttgcccaaa 13655
Query: 181 tgttatgcggaaccaagcgttttcaaaagaaatgtaataaatgagcgacaattaaatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13656 tgttatgcggaaccaagcgttttcaaaagaaatgtaataaatgagcgacaattaaatgga 13715
Query: 241 taatcgagagccaatctcttgaagatagttggaaatatgaaagacagttcggcgttctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13716 taatcgagagccaatctcttgaagatagttggaaatatgaaagacagttcggcgttctct 13775
Query: 301 tcatctttttattcgaaaaacacgtcagkg-tgttcgattccatttcattatttggaaat 359
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 13776 tcatctttttattcgaaaaacacgtcagtggtgttcgattccatttcattatttggaaat 13835
Query: 360 gttgacgttatgccaaattttgaaattttacctcggttcgttgaatgtgatatgatgtag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13836 gttgacgttatgccaaattttgaaattttacctcggttcgttgaatgtgatatgatgtag 13895
Query: 420 cgagttagtgtcagcagaggcttggaatctgtagaaccgacagagcaagagatggacaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13896 cgagttagtgtcagcagaggcttggaatctgtagaaccgacagagcaagagatggacaat 13955
Query: 480 ggtgtgcttatctgamacgaactttaamatttcagtgcattaagtgactaattgttacaa 539
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 13956 ggtgtgcttatctgaaacgaactttaaaatttcagtgcattaagtgactaattgttacaa 14015
Query: 540 atttgtgtacatagataggatctgacacgttcatacatgtgagcgaatataaaamamata 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 14016 atttgtgtacatagataggatctgacacgttcatacatgtgagcgaatataaaaaaaata 14075
Query: 600 tggcctgaaaccagaaggctgtatgattgataataatgacagtaaaattcattggcgctg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14076 tggcctgaaaccagaaggctgtatgattgataataatgacagtaaaattcattggcgctg 14135
Query: 660 ttgattatatgtgcttgaattgatctgagtttggtgtggtgattgttgattaasattact 719
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 14136 ttgattatatgtgcttgaattgatctgagtttggtgtggtgattgttgattaagattact 14195
Query: 720 cgtgtttgttgtaggcatcaggccgaacgcttcagaggatgaagcaaccgctgcaagtgc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14196 cgtgtttgttgtaggcatcaggccgaacgcttcagaggatgaagcaaccgctgcaagtgc 14255
Query: 780 ggctaaaggatcgttagcaaagttaatcgattgtggaactgcctgcacggttggaggtgg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14256 ggctaaaggatcgttagcaaagttaatcgattgtggaactgcctgcacggttggaggtgg 14315
Query: 840 attcgacggagcaggaggcaacgtaggtgcca 871
||||||||||||||||||||||||||||||||
Sbjct: 14316 attcgacggagcaggaggcaacgtaggtgcca 14347
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5995
Number of Sequences: 1807
Number of extensions: 5995
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 871
length of database: 10,358,551
effective HSP length: 16
effective length of query: 855
effective length of database: 10,329,639
effective search space: 8831841345
effective search space used: 8831841345
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)